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Sample GSM639881 Query DataSets for GSM639881
Status Public on Dec 15, 2010
Title Suprabasal epidermal cells, Sample 1
Sample type RNA
Source name Human epidermis from brest reduction
Organism Homo sapiens
Characteristics cell type: Suprabasal epidermal cells
donor: 1
Extracted molecule total RNA
Extraction protocol Standard Affymetrix protocol
Label Biotin
Label protocol Standard Affymetrix protocol
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS 5.0
Submission date Dec 14, 2010
Last update date Dec 15, 2010
Contact name Miroslav Blumenberg
Phone 212 263-5924
Organization name NYU School of Medicine
Department Dermatology
Lab Blumenberg
Street address 455 First Ave #874
City New York
State/province NY
ZIP/Postal code 10016
Country USA
Platform ID GPL571
Series (1)
GSE26059 Epidermal differentiation: basal vs. suprabasal keratinocytes

Data table header descriptions
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)

Data table
AFFX-BioB-5_at 129.992 P 0.000445901
AFFX-BioB-M_at 233.984 P 5.16732e-05
AFFX-BioB-3_at 106.185 P 0.000146581
AFFX-BioC-5_at 299.504 P 6.02111e-05
AFFX-BioC-3_at 237.377 P 4.42873e-05
AFFX-BioDn-5_at 323.362 P 4.42873e-05
AFFX-BioDn-3_at 1914.02 P 7.00668e-05
AFFX-CreX-5_at 4532.85 P 5.16732e-05
AFFX-CreX-3_at 5117.45 P 4.42873e-05
AFFX-DapX-5_at 9.58595 A 0.0726999
AFFX-DapX-M_at 6.87075 A 0.645547
AFFX-DapX-3_at 4.92543 A 0.659339
AFFX-LysX-5_at 1.00331 A 0.9273
AFFX-LysX-M_at 3.4376 A 0.52976
AFFX-LysX-3_at 8.42386 A 0.16584
AFFX-PheX-5_at 1.01003 A 0.891021
AFFX-PheX-M_at 0.796372 A 0.916408
AFFX-PheX-3_at 0.877061 A 0.969024
AFFX-ThrX-5_at 8.69849 A 0.455413
AFFX-ThrX-M_at 0.825677 A 0.969024

Total number of rows: 22277

Table truncated, full table size 668 Kbytes.

Supplementary file Size Download File type/resource
GSM639881_Alix_Gazel_2-19-04_B4-_B1-_4_U133A_2.0.CEL.gz 1.9 Mb (ftp)(http) CEL
GSM639881_Alix_Gazel_2-19-04_B4-_B1-_4_U133A_2.0.CHP.gz 442.8 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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