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Sample GSM617629 Query DataSets for GSM617629
Status Public on Nov 05, 2010
Title Prostate cancer primary tumor PR48
Sample type RNA
 
Source name Human prostate cancer
Organism Homo sapiens
Characteristics tissue: Prostate cancer primary tumor
recurrence status: Recurrent
Extracted molecule total RNA
Extraction protocol RNeasy kit
Label biotin
Label protocol Biotinylated cRNA was prepared according to standard Affymetrix protocols
 
Hybridization protocol Following fragmentation, cRNA was hybridized to one U133A Affymetrix GeneChip.
Scan protocol GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
Description PR48
Prostate cancer primary tumor
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Nov 04, 2010
Last update date Nov 04, 2010
Contact name Steve Goodison
Organization name M. D. Anderson Cancer Center Orlando
Department Cancer Research Institute
Street address 6900 Lake Nona Blvd
City Orlando
ZIP/Postal code 32827
Country USA
 
Platform ID GPL96
Series (1)
GSE25136 Optimizing molecular signatures for prostate cancer recurrence

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1007_s_at 1189.3
1053_at 2628.6
117_at 1675.7
121_at 2630.4
1255_g_at 2414.6
1294_at 3625.3
1316_at 15694.1
1320_at 31078.6
1405_i_at 40996.5
1431_at 32.3
1438_at 15.3
1487_at 4.3
1494_f_at 46
1598_g_at 52.8
160020_at 21.2
1729_at 7.4
1773_at 7.5
177_at 25.9
179_at 11.9
1861_at 37

Total number of rows: 22283

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM617629.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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