|
Status |
Public on May 22, 2022 |
Title |
Aosa04jaw |
Sample type |
SRA |
|
|
Source name |
jaw muscle
|
Organism |
Anolis osa |
Characteristics |
tissue: jaw muscle Sex: male
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted from whole muscle using Trizol extractions Libraries were constructed using BGI
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
BGISEQ-500 |
|
|
Data processing |
Adaptors trimmed, low quality ends removed and pair ends overlapped with HTStream Sequences mapped to Anolis carolinensis using STAR genes counted using STAR Assembly: Anolis carolinensis genome Supplementary files format and content: tab deliminated .txt file with raw read counts per loci
|
|
|
Submission date |
May 19, 2022 |
Last update date |
May 22, 2022 |
Contact name |
Andrea Lyn Liebl |
E-mail(s) |
andrea.liebl@usd.edu
|
Phone |
6056586711
|
Organization name |
University of South Dakota
|
Department |
Biology
|
Street address |
414 E Clark Street
|
City |
Vermillion |
State/province |
SD |
ZIP/Postal code |
57069 |
Country |
USA |
|
|
Platform ID |
GPL32274 |
Series (1) |
GSE203413 |
Gene expression and muscle contractile physiology in anoles |
|
Relations |
BioSample |
SAMN28555512 |
SRA |
SRX15388090 |