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Sample GSM611556 Query DataSets for GSM611556
Status Public on Oct 27, 2010
Title MM_2_HSC
Sample type RNA
Source name Bone Marrow
Organism Homo sapiens
Characteristics cell type: hematopoietic stem cells
disease state: Multiple Myeloma Patient
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy micro kit (Qiagen; 74004)
Label Biotin
Label protocol GeneChip Expression 3’-Amplification One-Cycle-Target Labeling & Control Reagents
(Affymetrix; 900493)
Hybridization protocol According to manufacturer's instructions
Scan protocol According to manufacturer's instructions
Description (MM) Multiple Myeloma / Hematopoietic Stem Cells
Data processing MAS 5.0, Scaling Factor 500
Submission date Oct 21, 2010
Last update date Oct 26, 2010
Contact name Ingmar Bruns
Phone +49-211-81-17736
Fax +49-211-81-18853
Organization name University of Düsseldorf
Department Hematology, Oncology and Clinical Immunology
Lab Experimental Hematology
Street address Moorenstr. 5
City Düsseldorf
State/province NRW
ZIP/Postal code 40225
Country Germany
Platform ID GPL571
Series (1)
GSE24870 Gene expression profiling of CD34+ subsets in Multiple Myeloma and healthy individuals

Data table header descriptions
VALUE Expression Value
ABS_CALL Absent Call
DETECTION P-VALUE Detection p-Value

Data table
AFFX-BioB-5_at 2635.32 P 4.42873e-05
AFFX-BioB-M_at 5374.43 P 4.42873e-05
AFFX-BioB-3_at 3780.81 P 4.42873e-05
AFFX-BioC-5_at 7603.46 P 4.42873e-05
AFFX-BioC-3_at 7011.4 P 4.42873e-05
AFFX-BioDn-5_at 16162.9 P 4.42873e-05
AFFX-BioDn-3_at 22939.8 P 4.42873e-05
AFFX-CreX-5_at 50199.5 P 5.16732e-05
AFFX-CreX-3_at 51622.2 P 4.42873e-05
AFFX-DapX-5_at 15.777 A 0.440646
AFFX-DapX-M_at 5.16133 A 0.978107
AFFX-DapX-3_at 2.6611 A 0.966323
AFFX-LysX-5_at 3.61851 A 0.772364
AFFX-LysX-M_at 13.3159 A 0.354441
AFFX-LysX-3_at 24.3604 A 0.368427
AFFX-PheX-5_at 36.7919 A 0.195266
AFFX-PheX-M_at 3.77394 A 0.891021
AFFX-PheX-3_at 40.5325 A 0.262827
AFFX-ThrX-5_at 5.45458 A 0.544587
AFFX-ThrX-M_at 3.85842 A 0.772442

Total number of rows: 22277

Table truncated, full table size 678 Kbytes.

Supplementary file Size Download File type/resource
GSM611556_MM_2_HSC.CEL.gz 1.7 Mb (ftp)(http) CEL
GSM611556_MM_2_HSC.CHP.gz 124.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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