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Sample GSM605923 Query DataSets for GSM605923
Status Public on Oct 08, 2010
Title ZR75
Sample type RNA
Source name Cultured cell line
Organism Homo sapiens
Characteristics cell type: breast cancer cell
cell line: ZR75
Treatment protocol No treatment
Growth protocol Subconfuent breast cancer cell lines
Extracted molecule total RNA
Extraction protocol RNeasy mini kit (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared using Ambion MessageAmp Premier labeling kit.
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human U133A plus 2.0 arrays. Affymetrix GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix Scanner 3000 7G.
Description Gene expression data from breast cancer cell lines
Data processing The data were analyzed with RMA (Robust Multichip Average) using Bioconductor
Submission date Oct 07, 2010
Last update date Oct 07, 2010
Contact name Igor Shats
Organization name Duke University
Street address 101 Science Drive
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
Platform ID GPL571
Series (2)
GSE24578 Basal gene expression of breast cancer cell lines
GSE24717 Using a Stem Cell-Based Signature to Guide Therapeutic Selection in Cancer

Data table header descriptions

Data table
1007_s_at 11.63087469
1053_at 8.055183867
117_at 6.410285119
121_at 8.21844857
1255_g_at 3.330836431
1294_at 5.866272433
1316_at 6.121049806
1320_at 5.334510219
1405_i_at 7.0047806
1431_at 4.154890881
1438_at 6.76248019
1487_at 8.747951767
1494_f_at 7.3450627
1598_g_at 9.299206461
160020_at 7.140100771
1729_at 9.435957714
177_at 5.582305052
1773_at 6.441098273
179_at 9.079905388
1861_at 7.327177423

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM605923.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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