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Sample GSM5436 Query DataSets for GSM5436
Status Public on May 02, 2003
Title fetal testis somatic cells
Sample type SAGE
Anchor NlaIII
Tag Count 61950
Tag Length 10
 
Source name testes from Wv/Wv mice
Organism Mus musculus
Extracted molecule total RNA
 
Description RNA was extracted from testes of Wv/Wv fetuses at day 18 post coitum. These testes are largely devoid of germ cells and SAGE library will represent somatic cells of the fetal testis
 
Submission date Apr 04, 2003
Last update date Nov 19, 2008
Contact name Peter James O'Shaughnessy
E-mail(s) p.j.o'shaughnessy@vet.gla.ac.uk
Phone ++ 44 141 330 5793
Fax ++ 44 141 330 5797
Organization name University of Glasgow Veterinary School
Department Veterinary Preclinical Studies
Street address Bearsden Rd
City Glasgow
ZIP/Postal code G61 1QH
Country United Kingdom
 
Platform ID GPL11
Series (1)
GSE366 Somatic cells in testes

Data table header descriptions
TAG Tag sequence
COUNT Number of times tag appears in library
TPM tags per million

Data table
TAG COUNT TPM
GTGGCTCACA 981 15835.35
CCTTTAATCC 811 13091.20
TGGTTGCTGG 329 5310.73
GAAAATGAGA 243 3922.52
ATGATGGTAG 165 2663.44
GCTGCCCTCC 157 2534.30
ATACTGACAT 149 2405.17
CCCTTCTTCT 97 1565.78
TAGAGACTGC 97 1565.78
ACCTGTGCCC 90 1452.78
GAAGGAGTTA 82 1323.65
TGGGTTGTCT 82 1323.65
AACAATTTGG 81 1307.51
CAAACTCTCA 81 1307.51
GGCTTTGGTC 78 1259.08
TCGCTATATT 76 1226.80
ATTTTCAGTT 72 1162.23
TATGTCAAGC 72 1162.23
CTAGTCTTTG 71 1146.09
TGACCCCGGG 68 1097.66

Total number of rows: 42046

Table truncated, full table size 781 Kbytes.




Supplementary data files not provided

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