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Sample GSM5357064 Query DataSets for GSM5357064
Status Public on Jun 05, 2021
Title CTL1
Sample type SRA
Source name whole blood
Organism Homo sapiens
Characteristics tissue: whole blood
disease state: control
gender: female
age: 40
tsh: 3.0
ft4: 1.2
Extracted molecule total RNA
Extraction protocol The venous blood was collected in the PAXgene Blood RNA tube and extracted with the PAXgene Blood RNA Kit.
Ion AmpliSeq Transcriptome Human Gene Expression Kit Catalog Number A26325, A26326, and A26327
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Ion Torrent Proton
Data processing The alignment was made by ION S5 default protocol.
We made a conversion from .bam to fastq through 'samtools fastq'
The compression to bz2 was made through bzip2.
Genome_build: Hg19
Supplementary_files_format_and_content: xlsx file containing the reads of each sample
Submission date Jun 04, 2021
Last update date Jun 06, 2021
Contact name Robson José de Almeida
Organization name Universidade Nove de Julho
Department Pós Graduação Stricto Sensu em Medicina
Lab Molecular Innovation and Biotechnology Laboratory
Street address RUA VERGUEIRO 235 249
State/province SAO PAULO
ZIP/Postal code 01504-001
Country Brazil
Platform ID GPL17303
Series (1)
GSE176153 Differentially Expressed Mitochondrial Circulating mRNA in Hypothyroidism Could Be Useful as a Survivor Biomarker in Nonthyroidal Illness Syndrome
BioSample SAMN19570279
SRA SRX11067357

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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