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Sample GSM52629

Query DataSets for GSM52629

Status

Public on Jun 03, 2005

Title

Ambion 2X Tumor Sample 1

Sample type

RNA

Source name

Total RNA from Breast Adenocarcinoma Cell Line

Organism

Homo sapiens

Extracted molecule

total RNA

Description

This sample is part of a study that compares small sample amplification technologies. The analysis looks at differential gene expression when compared to one round of T7 amplification. A tumor cell line was used in comparison to a human reference RNA in this study.
Keywords = amplification
Keywords = small sample
Keywords = Affymetrix

Submission date

May 28, 2005

Last update date

Jun 02, 2005

Contact name

Chin-Yi Chu

E-mail(s)

chinyi_chu@urmc.rochester.edu

Phone

(585)273-2850

Organization name

University of Rochester

Department

Environmental Medicine

Lab

Functional Genomic Center

Street address

75 Elmwood Avenue

City

Rochester

State/province

ZIP/Postal code

14642

Country

USA

Platform ID

GPL571

Series (1)

GSE2723

Small Sample Amplification Technologies

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
AFFX-BioB-5_at	227.4095616
AFFX-BioB-M_at	261.1553109
AFFX-BioB-3_at	233.8453219
AFFX-BioC-5_at	583.3381706
AFFX-BioC-3_at	760.5259033
AFFX-BioDn-5_at	1316.162753
AFFX-BioDn-3_at	3175.556341
AFFX-CreX-5_at	8292.544393
AFFX-CreX-3_at	9077.027334
AFFX-DapX-5_at	15.62132563
AFFX-DapX-M_at	11.31439477
AFFX-DapX-3_at	11.52741991
AFFX-LysX-5_at	11.03978493
AFFX-LysX-M_at	13.07412989
AFFX-LysX-3_at	10.47770715
AFFX-PheX-5_at	12.89454559
AFFX-PheX-M_at	12.54533422
AFFX-PheX-3_at	70.42903788
AFFX-ThrX-5_at	23.49665552
AFFX-ThrX-M_at	12.1206709

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM52629.CEL.gz	3.3 Mb	(ftp)(http)	CEL
GSM52629.EXP.gz	368 b	(ftp)(http)	EXP