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Sample GSM5172207 Query DataSets for GSM5172207
Status Public on Aug 05, 2021
Title retina, CTRL
Sample type SRA
 
Source name retina
Organism Macaca fascicularis
Characteristics disease state: control
tissue: retina
Extracted molecule polyA RNA
Extraction protocol All retina tissues were digested at 37℃, and were dissociated and triturated into single cell suspensions with 0.04% bovine serum albumin (BSA) in PBS solution. Single cell suspensions were diluted at a concentration of 500-1800 cells/uL in 0.04% BSA/Ames.
10x Genomics Chromium single cell system with v2
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model HiSeq X Ten
 
Data processing Cellranger v3.1 was used for demultiplexing, aligment and quantification.
Genome_build: Macaca_fascicularis_5.0
Supplementary_files_format_and_content: h5 file
 
Submission date Mar 15, 2021
Last update date Aug 05, 2021
Contact name yuhua xiao
E-mail(s) xiaoyh26@mail2.sysu.edu.cn
Phone 18728192414
Organization name Sun Yat-sen University
Department zhongshan Ophthalmic center
Street address jinsui load
City guangzhou
State/province guangdong province
ZIP/Postal code 510627
Country China
 
Platform ID GPL23096
Series (1)
GSE168908 Single-cell transcriptome profiling reveals the suppressive role of retinal neurons in microglia activation under diabetes mellitus
Relations
BioSample SAMN18311289
SRA SRX10341669

Supplementary file Size Download File type/resource
GSM5172207_ctrl.h5 16.2 Mb (ftp)(http) H5
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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