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Sample GSM50696 Query DataSets for GSM50696
Status Public on Jun 27, 2005
Title 040721-C3
Sample type RNA
 
Source name cynomologus macaque whole blood
Organism Macaca fascicularis
Extracted molecule total RNA
 
Description Cynomologus macaque (Macaca fascicularis). To conserve animals, we acquired blood samples from NHPs already in use with other research protocols. Male cynomologus macaques (Covance, Denver, PA) were wild caught and of Vietnamese origin. In a separate experiment, these animals had been previously exposed to human butyrylcholinesterase and survived a 5.5xLD50 challenge of soman in December 2003. The animals were certified to be in good health and weighed 3-4 kg at the time of the blood collection (May 13, 2004). Whole blood tissue from each donor was collected using a 5 cc syringe and immediately injected into a PAXgene™ Blood RNA Collection Tube (PreAnalytiX, Franklin Lakes, NJ). Whole blood tissue was withdrawn from the right or left saphenous vein. Approximately 2.5 mL of whole blood tissue was obtained from the rhesus macaques. All samples were incubated in the PAXgene™ Blood RNA tube for 24 hrs at room temperature prior to RNA extraction.
Keywords = cynomologus macaque
Keywords = non-human primate
Keywords = blood
 
Submission date May 06, 2005
Last update date Aug 28, 2018
Contact name James F Dillman
E-mail(s) james.f.dillman2.civ@mail.mil
Phone 4104361723
Organization name U.S. Army Medical Research Institute of Chemical Defense
Department Cell and Molecular Biology Branch
Lab Molecular Toxicology Team
Street address 3100 Ricketts Point Rd
City Aberdeen Proving Ground
State/province MD
ZIP/Postal code 21010-5400
Country USA
 
Platform ID GPL570
Series (1)
GSE2634 Comparison of human and non-human primate gene expression profiles
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL present/absent/marginal call
DETECTION P-VALUE significance level of detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 451.4 P 0.000127
AFFX-BioB-M_at 1137.6 P 0.000044
AFFX-BioB-3_at 676.6 P 0.00006
AFFX-BioC-5_at 1413.3 P 0.00007
AFFX-BioC-3_at 1436.1 P 0.000044
AFFX-BioDn-5_at 1346 P 0.000044
AFFX-BioDn-3_at 5153.7 P 0.000044
AFFX-CreX-5_at 11312.7 P 0.000044
AFFX-CreX-3_at 13035.6 P 0.000044
AFFX-DapX-5_at 0.7 A 0.978098
AFFX-DapX-M_at 0.9 A 0.86866
AFFX-DapX-3_at 17 A 0.275146
AFFX-LysX-5_at 7.5 A 0.631562
AFFX-LysX-M_at 17.2 A 0.147939
AFFX-LysX-3_at 6.5 A 0.300606
AFFX-PheX-5_at 1.7 A 0.672921
AFFX-PheX-M_at 2.1 A 0.814869
AFFX-PheX-3_at 1.2 A 0.966323
AFFX-ThrX-5_at 8.7 A 0.724871
AFFX-ThrX-M_at 11.5 A 0.195266

Total number of rows: 54675

Table truncated, full table size 1387 Kbytes.




Supplementary file Size Download File type/resource
GSM50696.CEL.gz 8.1 Mb (ftp)(http) CEL
GSM50696.CHP.gz 304.9 Kb (ftp)(http) CHP
GSM50696.EXP.EXP.gz 370 b (ftp)(http) EXP
GSM50696.RPT.gz 1.1 Kb (ftp)(http) RPT
Processed data provided as supplementary file

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