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Sample GSM50690 Query DataSets for GSM50690
Status Public on Jun 27, 2005
Title 040721-A1
Sample type RNA
 
Source name African green monkey whole blood
Organism Chlorocebus aethiops
Extracted molecule total RNA
 
Description African green monkey (Chlorocebus aethiops)

To conserve animals, we acquired blood samples from NHPs already in use with other research protocols. Male African green monkeys (n=4) were wild caught from the Caribbean island of St. Kitts. These animals were naïve and certified in good health at the time of the blood collection. These animals weighed 5.5-6.8 kg at the time of the blood collection.

Whole blood tissue from each donor was collected using a 5 cc syringe and immediately injected into a PAXgene™ Blood RNA Collection Tube (PreAnalytiX, Franklin Lakes, NJ). Whole blood tissue was withdrawn from the right or left saphenous vein. Approximately 2.5 mL of whole blood tissue was obtained from the rhesus macaques. All samples were incubated in the PAXgene™ Blood RNA tube for 24 hrs at room temperature prior to RNA extraction.

Keywords = African green monkey
Keywords = non-human primate
Keywords = blood
 
Submission date May 06, 2005
Last update date Aug 28, 2018
Contact name James F Dillman
E-mail(s) james.f.dillman2.civ@mail.mil
Phone 4104361723
Organization name U.S. Army Medical Research Institute of Chemical Defense
Department Cell and Molecular Biology Branch
Lab Molecular Toxicology Team
Street address 3100 Ricketts Point Rd
City Aberdeen Proving Ground
State/province MD
ZIP/Postal code 21010-5400
Country USA
 
Platform ID GPL570
Series (1)
GSE2634 Comparison of human and non-human primate gene expression profiles
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL present/absent/marginal call
DETECTION P-VALUE significance level of detection

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 412.9 P 0.00011
AFFX-BioB-M_at 1188.4 P 0.000044
AFFX-BioB-3_at 662.9 P 0.000052
AFFX-BioC-5_at 1600.6 P 0.000044
AFFX-BioC-3_at 1358 P 0.000044
AFFX-BioDn-5_at 1508 P 0.000044
AFFX-BioDn-3_at 4746.8 P 0.000044
AFFX-CreX-5_at 10767.1 P 0.000052
AFFX-CreX-3_at 12206.7 P 0.000044
AFFX-DapX-5_at 8 A 0.340661
AFFX-DapX-M_at 1.5 A 0.737173
AFFX-DapX-3_at 3.3 A 0.699394
AFFX-LysX-5_at 5 A 0.354453
AFFX-LysX-M_at 17.9 A 0.147939
AFFX-LysX-3_at 2.2 A 0.275146
AFFX-PheX-5_at 1 A 0.891021
AFFX-PheX-M_at 6.3 A 0.686277
AFFX-PheX-3_at 1.1 A 0.971543
AFFX-ThrX-5_at 1.8 A 0.814869
AFFX-ThrX-M_at 1.4 A 0.672921

Total number of rows: 54675

Table truncated, full table size 1379 Kbytes.




Supplementary file Size Download File type/resource
GSM50690.CEL.gz 7.8 Mb (ftp)(http) CEL
GSM50690.CHP.gz 307.4 Kb (ftp)(http) CHP
GSM50690.EXP.EXP.gz 370 b (ftp)(http) EXP
GSM50690.RPT.gz 1.1 Kb (ftp)(http) RPT
Processed data provided as supplementary file

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