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Sample GSM50644 Query DataSets for GSM50644
Status Public on May 07, 2005
Title Spotted dick Chromatin immunopurification 3
Sample type genomic
 
Channel 1
Source name anti-spotted dick chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin enriched by immunopurification with antibodies against the Drosophila transcription factor spotted dick compared with pre immune sera on a cDNA microarray
 
Submission date May 05, 2005
Last update date May 27, 2005
Contact name Andrew Robin Page
E-mail(s) arp29@cam.ac.uk
Phone +44 (0)7930 962228
Organization name University of Cambridge
Department Department of Genetics
Lab Cancer Research UK Cell Cycle Genetics Group
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2632 Spotted Dick Chromatin Immunopurification

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000000200 -0.225404 770 444 210.529 105.265 128 71 78.5778 25.2042 293 3179
1000000206 -0.613294 1318 877 449.228 243.146 357 259 194.221 88.956 293 3179
1000000207 -0.0764218 1347 688 461.089 163.086 282 159 166.051 51.891 293 3179
1000000211 0.821259 1158 557 302.45 127.504 161 91 88.956 35.5824 293 3179
1000000215 -0.63683 920 527 324.689 131.951 202 92 115.643 40.0302 349 3095
1000000216 -0.408116 960 528 327.655 111.195 198 83 127.504 31.1346 421 2983
1000000217 -0.602067 1960 706 1143.08 185.325 612 182 416.611 63.7518 293 3179
1000000224 0 489 0 124.538 0 90 0 37.065 0 3844
1000000225 -1.69231 570 437 197.186 102.299 130 79 75.6126 29.652 489 2871
1000000227 0 529 0 185.325 0 109 0 57.8214 0 3844
1000000230 1.61432 2867 603 902.903 177.912 282 134 161.603 56.3388 293 3179
1000000233 2.73203 2900 475 1120.85 99.3342 177 76 102.299 25.2042 489 2871
1000000234 -0.92125 724 457 201.634 96.369 145 71 81.543 25.2042 665 2643
1000000235 -0.113894 732 513 186.808 131.951 113 83 51.891 34.0998 293 3179
1000000236 0 533 0 126.021 0 75 0 26.6868 0 3844
1000000238 -0.788734 559 454 137.882 97.8516 93 70 40.0302 25.2042 665 2643
1000000241 -0.876688 2152 719 1300.24 186.808 814 182 609.349 62.2692 349 3095
1000000242 -0.687374 1067 501 404.75 108.23 266 101 173.464 32.6172 421 2983
1000000243 -0.943981 1331 472 701.27 100.817 432 86 378.063 28.1694 349 3095
1000000247 1.05392 1015 459 298.003 106.747 127 79 91.9212 26.6868 293 3179

Total number of rows: 5365

Table truncated, full table size 401 Kbytes.




Supplementary data files not provided
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