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Sample GSM50643 Query DataSets for GSM50643
Status Public on May 07, 2005
Title Spotted dick Chromatin immunopurification 2
Sample type genomic
 
Channel 1
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name anti-spotted dick chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Chromatin enriched by immunopurification with antibodies against the Drosophila transcription factor spotted dick compared with pre immune sera on a cDNA microarray
 
Submission date May 05, 2005
Last update date May 27, 2005
Contact name Andrew Robin Page
E-mail(s) arp29@cam.ac.uk
Phone +44 (0)7930 962228
Organization name University of Cambridge
Department Department of Genetics
Lab Cancer Research UK Cell Cycle Genetics Group
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1898
Series (1)
GSE2632 Spotted Dick Chromatin Immunopurification

Data table header descriptions
ID_REF
VALUE vSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1000000200 0.169316 1033 298 493.706 62.2692 430 53 234.251 16.3086 293 3179
1000000206 0.220289 692 369 298.003 71.1648 283 76 133.434 20.7564 293 3179
1000000207 0.194335 670 354 286.142 65.2344 270 66 120.091 17.7912 293 3179
1000000211 0.666317 469 428 120.091 114.16 224 87 72.6474 35.5824 293 3179
1000000215 -0.00502438 591 408 272.798 93.4038 216 87 134.917 28.1694 349 3095
1000000216 0.0855883 828 390 535.219 99.3342 325 87 210.529 29.652 293 3179
1000000217 0.479441 784 410 428.471 88.956 366 105 170.499 32.6172 421 2983
1000000224 -0.0444459 488 312 247.594 63.7518 171 56 130.469 14.826 293 3179
1000000225 0.055965 587 322 351.376 72.6474 220 59 174.947 19.2738 421 2983
1000000227 0.445078 449 321 146.777 59.304 195 51 96.369 13.3434 421 2983
1000000230 2.52003 474 349 130.469 66.717 531 65 127.504 17.7912 293 3179
1000000233 1.7204 636 338 174.947 66.717 518 55 131.951 14.826 421 2983
1000000234 -0.50941 480 320 123.056 60.7866 131 52 44.478 13.3434 489 2871
1000000235 -0.0157299 406 336 126.021 68.1996 140 59 54.8562 16.3086 293 3179
1000000236 -0.148505 321 307 69.6822 59.304 94 51 26.6868 13.3434 349 3095
1000000238 -0.32628 401 329 115.643 66.717 113 59 40.0302 16.3086 349 3095
1000000241 0.603151 888 439 480.362 103.782 449 121 257.972 45.9606 421 2983
1000000242 0.69989 1244 375 778.365 77.0952 700 83 428.471 23.7216 421 2983
1000000243 0.434154 1393 347 1076.37 68.1996 686 70 584.144 20.7564 349 3095
1000000247 0.804528 472 304 139.364 65.2344 239 54 85.9908 14.826 349 3095

Total number of rows: 5365

Table truncated, full table size 404 Kbytes.




Supplementary data files not provided
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