NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM48672 Query DataSets for GSM48672
Status Public on Oct 19, 2005
Title HCaRG-9 HG-U133 Plus 2.0
Sample type RNA
 
Source name HEK293 cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description HEK293 cells were transfected with pcDNAI/Neo (Invitrogen) plasmid containing HCaRG. Stable transfectants, overexpressing HCaRG, were synchronized and grown in the presence of 10% FBS for 48 h. Total RNAs were purified with the mini RNeasy kit (Qiagen).

Chip was normalized using all probe sets scaling option and target signal at 500.
 
Submission date Apr 21, 2005
Last update date Aug 28, 2018
Contact name Johanne Tremblay
E-mail(s) johanne.tremblay@umontreal.ca
Phone 514-890-8000-12721
Organization name CHUM Research Center, Hotel-Dieu
Street address
City Montreal
State/province QUE
ZIP/Postal code H2W 1T8
Country Canada
 
Platform ID GPL570
Series (2)
GSE2555 HCaRG-9 vs NEO-1
GSE4737 HCaRG vs NEO
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE mean signal intensity
ABS_CALL P present, M marginal, A absent
DETECTION P-VALUE p value for call; present: less than 0.05, marginal: 0.05-0.065, absent: more than 0.065

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
208834_x_at 83291.9 P 0.000732
208825_x_at 81054.9 P 0.000244
213084_x_at 78998.6 P 0.000244
200817_x_at 76792.3 P 0.000244
200936_at 76478.3 P 0.000244
211542_x_at 75280.3 P 0.000244
213414_s_at 72606.2 P 0.000244
210646_x_at 72274.4 P 0.000244
201429_s_at 71922.6 P 0.000244
200869_at 71397 P 0.000244
AFFX-r2-P1-cre-3_at 69758.6 P 0.000244
212790_x_at 69604.3 P 0.000244
200095_x_at 69550.3 P 0.000244
221798_x_at 69398.6 P 0.000244
200031_s_at 69242.7 P 0.000244
226131_s_at 69064.2 P 0.000244
202649_x_at 68400 P 0.000244
AFFX-hum_alu_at 67495.2 P 0
217740_x_at 65889.6 P 0.000244
AFFX-r2-P1-cre-5_at 65619.1 P 0.000244

Total number of rows: 54675

Table truncated, full table size 1439 Kbytes.




Supplementary file Size Download File type/resource
GSM48672.CEL.gz 7.9 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap