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Sample GSM48668 Query DataSets for GSM48668
Status Public on Apr 22, 2005
Title underreplication 3
Sample type genomic
 
Channel 1
Source name genomic DNA from Su(UR)- drosophila larvae salivary glands
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name genomic DNA from 4xSu(UR)+ drosophila larvae salivary glands
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Genomic DNA from salivary glands of 4xSu(UR)+ and Su(UR)- strains were hybridized with the microarray to determine underreplicated areas in the drosophila polytene chromosomes
 
Submission date Apr 21, 2005
Last update date May 27, 2005
Contact name Stepan Belyakin
E-mail(s) belyakin@bionet.nsc.ru
Phone +73833333912
Organization name Institute of Cytology and Genetics
Street address
City Novosibirsk
ZIP/Postal code 630090
Country Russia
 
Platform ID GPL517
Series (1)
GSE2551 underreplication

Data table header descriptions
ID_REF
635 SIG Median Cy-5 signal intensity
635 BKG Median Cy-5 background intensity
532 SIG Median Cy-3 signal intensity
532 BKG Median Cy-3 background intensity
Ratio of Medians Cy-5/Cy-3 ratio
Total intensity normalized Ratio of medians (NF=0,849933)
VALUE log2 transformed data

Data table
ID_REF 635 SIG Median 635 BKG Median 532 SIG Median 532 BKG Median Ratio of Medians Total intensity normalized Ratio of medians (NF=0,849933) VALUE
1 19683 107 65535 237 null null null
2 3053 158 14720 392 null null null
3 1695 90 5720 236 0.293 0.249030369 -2.005606407
4 2733 75 8623 199 0.316 0.268578828 -1.896582513
5 1797 74 4128 180 0.436 0.370570788 -1.432178936
6 715 72 2139 191 0.33 0.28047789 -1.834041047
7 1609 78 1683 170 1.012 0.860132196 -0.217369686
8 4464 81 1955 168 2.453 2.084885649 1.059968257
9 274 77 445 175 0.73 0.62045109 -0.688610607
10 373 70 1190 183 0.301 0.255829833 -1.966743584
11 172 76 903 200 0.137 0.116440821 -3.102331178
12 412 86 487 227 1.254 1.065815982 0.091958372
13 294 85 434 226 1.005 0.854182665 -0.227383475
14 161 92 324 241 null null null
15 322 83 567 238 0.726 0.617051358 -0.696537523
16 85 91 188 205 null null null
17 96 102 186 199 null null null
18 103 178 200 214 null null null
19 108 105 180 186 null null null
20 170 81 205 176 null null null

Total number of rows: 47616

Table truncated, full table size 2193 Kbytes.




Supplementary data files not provided
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