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Sample GSM4804915 Query DataSets for GSM4804915
Status Public on Feb 23, 2023
Title LNCAP CONTROL #2
Sample type RNA
 
Source name LNCAP CELLS CONTROL
Organism Homo sapiens
Characteristics cell type: PROSTATE TUMOR CELL LINE
Extracted molecule total RNA
Extraction protocol RNEAsy mini kit Qiagen
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human gene 1.0 ST. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol Genechip Scanner 3000 7G
Description GENE EXPRESSION FROM LNCAP CELLS
Data processing The data were analyzed with Expression console (Affymetrix) (RMA) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Sep 28, 2020
Last update date Feb 23, 2023
Contact name Pedro Nicolau Neto
E-mail(s) pedronicolau.n@gmail.com
Organization name INCA
Department PCM
Street address 37 Andre Cavalcanti Street
City Rio de Janeiro
State/province RJ
ZIP/Postal code 20231-050
Country Brazil
 
Platform ID GPL6244
Series (1)
GSE158643 EXPRESSION DATA OF PROSTATE CELL LINES DU145 AND LNCAP AND HUMAN ASTROCYTES CO-CULTURED

Data table header descriptions
ID_REF
VALUE Quantification

Data table
ID_REF VALUE
7892501 8.24382
7892502 5.18562
7892503 3.05694
7892504 9.38706
7892505 3.01109
7892506 3.66477
7892507 3.7806
7892508 2.52582
7892509 12.0294
7892510 3.18405
7892511 3.20126
7892512 6.76001
7892513 4.26402
7892514 9.52184
7892515 9.97412
7892516 5.27439
7892517 3.9921
7892518 3.25146
7892519 3.53469
7892520 9.55417

Total number of rows: 33297

Table truncated, full table size 516 Kbytes.




Supplementary file Size Download File type/resource
GSM4804915_LNCAP_CTL_2_HuGene-1_0-st-v1_.CEL.gz 3.9 Mb (ftp)(http) CEL
GSM4804915_LNCAP_CTL_2_HuGene-1_0-st-v1_.rma-gene-default.chp.gz 255.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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