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Sample GSM4804913 Query DataSets for GSM4804913
Status Public on Feb 23, 2023
Title LNCAP CELLS CO-CULTURED WITH ASTROCYTE #1
Sample type RNA
 
Source name LNCAP CELLS CO-CULTURED WITH ASTROCYTE
Organism Homo sapiens
Characteristics cell type: PROSTATE TUMOR CELL LINE
Extracted molecule total RNA
Extraction protocol RNEAsy mini kit Qiagen
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human gene 1.0 ST. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
Scan protocol Genechip Scanner 3000 7G
Description GENE EXPRESSION FROM LNCAP CELLS CO-CULTURED WITH HUMAN ASTROCYTE
Data processing The data were analyzed with Expression console (Affymetrix) (RMA) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Sep 28, 2020
Last update date Feb 23, 2023
Contact name Pedro Nicolau Neto
E-mail(s) pedronicolau.n@gmail.com
Organization name INCA
Department PCM
Street address 37 Andre Cavalcanti Street
City Rio de Janeiro
State/province RJ
ZIP/Postal code 20231-050
Country Brazil
 
Platform ID GPL6244
Series (1)
GSE158643 EXPRESSION DATA OF PROSTATE CELL LINES DU145 AND LNCAP AND HUMAN ASTROCYTES CO-CULTURED

Data table header descriptions
ID_REF
VALUE Quantification

Data table
ID_REF VALUE
7892501 7.41625
7892502 6.0441
7892503 3.85757
7892504 8.92966
7892505 3.33995
7892506 4.23967
7892507 3.8096
7892508 3.23728
7892509 11.7398
7892510 3.10985
7892511 3.2724
7892512 6.5812
7892513 5.09672
7892514 9.14786
7892515 9.9549
7892516 4.61515
7892517 4.15116
7892518 2.73485
7892519 4.69631
7892520 9.55962

Total number of rows: 33297

Table truncated, full table size 516 Kbytes.




Supplementary file Size Download File type/resource
GSM4804913_LNCAP_CO_2_HuGene-1_0-st-v1_.CEL.gz 4.0 Mb (ftp)(http) CEL
GSM4804913_LNCAP_CO_2_HuGene-1_0-st-v1_.rma-gene-default.chp.gz 256.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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