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Status
Public on Apr 09, 2005
Title
Medium HIV-1 infection of human PBMCs in vitro, without N. gonorrheae (1)
Sample type
RNA
Source name
Peripheral blood mononuclear cells (PBMCs)
Organism
Homo sapiens Extracted molecule
total RNA
Description
We used Affymetrix U133A 2.0 chips to measure RNA expression levels in human PBMCs that were infected in vitro with a dosage series of HIV-1 (Bal) for 11d, followed by 6hr stimulation with N. gonorrheae.
Submission date
Apr 07, 2005
Last update date
May 27, 2005
Contact name
Monty Montano
E-mail(s)
mmontano@bu.edu Phone
617 414-4806
Fax
617 414-3561
URL
http://www.bmc.org/HIV-AIDS/MontyMontano.htm Organization name
Boston Medical Center
Department
Medicine
Lab
Center for HIV-1/AIDS Care and Research
Street address
650 Albany Street, Bldg X, room 640
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL571 Series (1)
GSE2505 HIV-1 burden influences host response to co-infection with Neisseria gonorrhoeae in vitro
Data table header descriptions ID_REF
VALUE Scaled intensity values
DETECTION P-VALUE Quality of measurement
ABS_CALL Present, absent or marginal call
U_S Unscaled, smoothed data from this medium HIV-1 sample (no pair)
Data table ID_REF VALUE DETECTION P-VALUE ABS_CALL U_S 1007_s_at
141.6
0.013092
P
43.3
1053_at
382.7
0.000388
P
82.9
117_at
79.3
0.05447
M
33
121_at
386.1
0.021866
P
83.4
1255_g_at
30.1
0.302547
A
24.9
1294_at
751.9
0.000219
P
143.5
1316_at
56.3
0.048995
P
29.3
1320_at
9.3
0.795978
A
21.5
1405_i_at
16735.2
0.000491
P
2768.9
1431_at
14.4
0.234557
A
22.4
1438_at
16.3
0.732537
A
22.7
1487_at
564.6
0.043968
P
112.7
1494_f_at
73.2
0.138765
A
32
1598_g_at
244.6
0.162935
A
60.2
160020_at
77.1
0.089405
A
32.7
1729_at
760.1
0.000562
P
144.8
177_at
14.1
0.781017
A
22.3
1773_at
56.8
0.458816
A
29.3
179_at
82.2
0.5
A
33.5
1861_at
230.3
0.00418
P
57.8
22277 699 Kbytes .Supplementary data files not provided
