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Status
Public on Apr 09, 2005
Title
High HIV-1 infection of human PBMCs in vitro, with N. gonorrheae (2)
Sample type
RNA
Source name
Peripheral blood mononuclear cells (PBMCs)
Organism
Homo sapiens Extracted molecule
total RNA
Description
We used Affymetrix U133A 2.0 chips to measure RNA expression levels in human PBMCs that were infected in vitro with a dosage series of HIV-1 (Bal) for 11d, followed by 6hr stimulation with N. gonorrheae.
Submission date
Apr 07, 2005
Last update date
May 27, 2005
Contact name
Monty Montano
E-mail(s)
mmontano@bu.edu Phone
617 414-4806
Fax
617 414-3561
URL
http://www.bmc.org/HIV-AIDS/MontyMontano.htm Organization name
Boston Medical Center
Department
Medicine
Lab
Center for HIV-1/AIDS Care and Research
Street address
650 Albany Street, Bldg X, room 640
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL571 Series (1)
GSE2505 HIV-1 burden influences host response to co-infection with Neisseria gonorrhoeae in vitro
Data table header descriptions ID_REF
VALUE Scaled intensity values
DETECTION P-VALUE Quality of measurement
ABS_CALL Present, absent or marginal call
U_S_Ave Average of unscaled, smoothed data from the high HIV-1 pair
Data table ID_REF VALUE DETECTION P-VALUE ABS_CALL U_S_Ave 1007_s_at
139.2
0.008689
P
51.4
1053_at
447.5
0.000388
P
165.3
117_at
24.4
0.35869
A
30.05
121_at
249.8
0.035163
P
83.7
1255_g_at
4.6
0.837065
A
23.5
1294_at
750.9
0.000219
P
191.1
1316_at
45.3
0.098054
A
27.45
1320_at
5.4
0.861235
A
23.8
1405_i_at
17503
0.000491
P
3941.5
1431_at
20.9
0.11716
A
26.55
1438_at
21
0.660468
A
23.45
1487_at
485.8
0.031336
P
146.8
1494_f_at
74.3
0.089405
A
39.2
1598_g_at
126.8
0.204022
A
49.35
160020_at
108
0.048995
P
52.05
1729_at
756.9
0.000388
P
215.75
177_at
15.9
0.621835
A
24.75
1773_at
65.3
0.284747
A
33.85
179_at
69.5
0.541184
A
44.6
1861_at
215.9
0.002228
P
70.2
22277 714 Kbytes .Supplementary data files not provided
