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Sample GSM46976 Query DataSets for GSM46976
Status Public on Mar 31, 2005
Title Lung - 8290
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 40-50
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 45
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: Yes
Pathological T: 2
Pathological N: 1
Pathological M: 0
Pathological Stage: 2B
Pathological Grade: 2
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 646.7 P 0.000297
AFFX-BioB-M_at 1032.9 P 4.4e-005
AFFX-BioB-3_at 441 P 0.000127
AFFX-BioC-5_at 1638.3 P 4.4e-005
AFFX-BioC-3_at 1815.7 P 5.2e-005
AFFX-BioDn-5_at 4336.3 P 4.4e-005
AFFX-BioDn-3_at 7033.7 P 4.4e-005
AFFX-CreX-5_at 19457.3 P 4.4e-005
AFFX-CreX-3_at 22505.7 P 4.4e-005
AFFX-DapX-5_at 47.3 A 0.300606
AFFX-DapX-M_at 68.8 A 0.165861
AFFX-DapX-3_at 93 P 0.001593
AFFX-LysX-5_at 2.2 A 0.824672
AFFX-LysX-M_at 44 A 0.48511
AFFX-LysX-3_at 48.3 A 0.108979
AFFX-PheX-5_at 5.7 A 0.712257
AFFX-PheX-M_at 4 A 0.883908
AFFX-PheX-3_at 44.1 A 0.205732
AFFX-ThrX-5_at 3.9 A 0.9273
AFFX-ThrX-M_at 28.2 A 0.287743

Total number of rows: 54675

Table truncated, full table size 1441 Kbytes.




Supplementary file Size Download File type/resource
GSM46976.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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