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GEO accession:
Sample GSM46975
Query DataSets for GSM46975
Status
Public on Mar 31, 2005
Title
Lung - 8284
Sample type
RNA
Source name
Lung
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.1
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 11-15
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 1
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: No
Pathological T: 1
Pathological N: 2
Pathological M: 0
Pathological Stage: 3A
Pathological Grade: 2
Primary Site: Lung
Histology: Mucin-producing adenocarcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE60486
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
95.2
M
0.062929
AFFX-BioB-M_at
41.4
A
0.300606
AFFX-BioB-3_at
13.4
A
0.645547
AFFX-BioC-5_at
164.7
P
0.00011
AFFX-BioC-3_at
165.1
P
0.00039
AFFX-BioDn-5_at
516.4
P
0.000446
AFFX-BioDn-3_at
693.7
P
0.000446
AFFX-CreX-5_at
2105
P
4.4e-005
AFFX-CreX-3_at
3337.9
P
5.2e-005
AFFX-DapX-5_at
1514
P
6e-005
AFFX-DapX-M_at
3190.7
P
7e-005
AFFX-DapX-3_at
6167.5
P
4.4e-005
AFFX-LysX-5_at
241.9
P
0.00011
AFFX-LysX-M_at
428.4
P
0.000127
AFFX-LysX-3_at
685.2
P
6e-005
AFFX-PheX-5_at
402.2
P
4.4e-005
AFFX-PheX-M_at
551.5
P
8.1e-005
AFFX-PheX-3_at
678
P
8.1e-005
AFFX-ThrX-5_at
506.5
P
0.000169
AFFX-ThrX-M_at
928
P
4.4e-005
Total number of rows:
54675
Table truncated, full table size
1443 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46975.CEL.gz
8.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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