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Sample GSM46967 Query DataSets for GSM46967
Status Public on Mar 31, 2005
Title Colon - 8204
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 80-90
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 34
Presenting Symptoms: Bright red stools
Presenting Symptoms: Diarrhea
Screening studies performed?: No
Diagnosis made by: Colonoscopy
Primary Site: Colon
Histology: Adenocarcinoma arising in a villous adenoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 973.9 P 0.001102
AFFX-BioB-M_at 437.6 A 0.102165
AFFX-BioB-3_at 207.7 A 0.131361
AFFX-BioC-5_at 288.8 P 0.021902
AFFX-BioC-3_at 428.5 P 0.020022
AFFX-BioDn-5_at 240.3 A 0.195266
AFFX-BioDn-3_at 4639.8 P 0.013811
AFFX-CreX-5_at 4253.7 P 0.021902
AFFX-CreX-3_at 4804.8 A 0.205732
AFFX-DapX-5_at 1153.8 P 0.000258
AFFX-DapX-M_at 3568.6 P 0.00141
AFFX-DapX-3_at 1451.7 P 0.000972
AFFX-LysX-5_at 445.4 P 0.00762
AFFX-LysX-M_at 211.9 A 0.368438
AFFX-LysX-3_at 624.2 P 0.001593
AFFX-PheX-5_at 826.3 P 0.000297
AFFX-PheX-M_at 334.8 P 0.028457
AFFX-PheX-3_at 533.4 P 0.009337
AFFX-ThrX-5_at 581.9 P 0.013811
AFFX-ThrX-M_at 634.8 P 0.00141

Total number of rows: 54675

Table truncated, full table size 1454 Kbytes.




Supplementary file Size Download File type/resource
GSM46967.CEL.gz 7.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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