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Sample GSM46963 Query DataSets for GSM46963
Status Public on Mar 31, 2005
Title Kidney - 4192
Sample type RNA
 
Source name Kidney
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 30
Prior Therapy: Radiation
Pathological T: 3a
Pathological N: X
Pathological M: 1
Pathological Metastatic Sites: Osseous
Pathological Stage: 4
Pathological Grade: 3
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 879 P 0.00039
AFFX-BioB-M_at 1112.1 P 4.4e-005
AFFX-BioB-3_at 548.7 P 7e-005
AFFX-BioC-5_at 2122.1 P 4.4e-005
AFFX-BioC-3_at 2326.8 P 4.4e-005
AFFX-BioDn-5_at 5665.5 P 4.4e-005
AFFX-BioDn-3_at 9292.9 P 4.4e-005
AFFX-CreX-5_at 26011 P 4.4e-005
AFFX-CreX-3_at 31460.2 P 4.4e-005
AFFX-DapX-5_at 422.2 P 0.000225
AFFX-DapX-M_at 1883 P 0.000581
AFFX-DapX-3_at 4150.6 P 5.2e-005
AFFX-LysX-5_at 159.5 P 0.004017
AFFX-LysX-M_at 334.1 P 0.003212
AFFX-LysX-3_at 853.6 P 0.000169
AFFX-PheX-5_at 190.8 P 0.001796
AFFX-PheX-M_at 287 P 0.001796
AFFX-PheX-3_at 486 P 0.000297
AFFX-ThrX-5_at 120.3 P 0.010317
AFFX-ThrX-M_at 393.4 P 9.5e-005

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.




Supplementary file Size Download File type/resource
GSM46963.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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