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Sample GSM46962 Query DataSets for GSM46962
Status Public on Mar 31, 2005
Title Breast - 37977
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.24
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Family History of Cancer?: No
Mammogram: Yes
Number of years in which a mammogram was obtained?: 0-5
Oral contraceptives?: Yes
Number of years of use? (Oral contraceptives): 16-20
Primary Site: Breast
Histology: Ductal Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 391.6 P 0.000662
AFFX-BioB-M_at 464.5 P 4.4e-005
AFFX-BioB-3_at 322.1 P 0.000446
AFFX-BioC-5_at 1099.7 P 4.4e-005
AFFX-BioC-3_at 1606 P 5.2e-005
AFFX-BioDn-5_at 3001.4 P 4.4e-005
AFFX-BioDn-3_at 5506.8 P 6e-005
AFFX-CreX-5_at 12648.5 P 5.2e-005
AFFX-CreX-3_at 16957.4 P 4.4e-005
AFFX-DapX-5_at 68.6 P 0.003595
AFFX-DapX-M_at 360.6 P 0.00141
AFFX-DapX-3_at 814.8 P 7e-005
AFFX-LysX-5_at 40.9 A 0.067661
AFFX-LysX-M_at 46.7 A 0.205732
AFFX-LysX-3_at 182.4 P 9.5e-005
AFFX-PheX-5_at 22.9 M 0.050229
AFFX-PheX-M_at 48.7 A 0.131361
AFFX-PheX-3_at 135.9 P 0.028457
AFFX-ThrX-5_at 44.5 A 0.275146
AFFX-ThrX-M_at 80.2 P 0.011384

Total number of rows: 54675

Table truncated, full table size 1443 Kbytes.




Supplementary file Size Download File type/resource
GSM46962.CEL.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table
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