NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM46961 Query DataSets for GSM46961
Status Public on Mar 31, 2005
Title Lung - 31907
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.0
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 66-70
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 63
Workplace or household smokers?: Yes
Pathological T: 1
Pathological N: 0
Pathological M: 0
Pathological Stage: 1A
Pathological Grade: 2
Primary Site: Lung
Histology: Papillary adenocarcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1087 P 0.000169
AFFX-BioB-M_at 2261 P 4.4e-005
AFFX-BioB-3_at 1143.4 P 4.4e-005
AFFX-BioC-5_at 3541.5 P 4.4e-005
AFFX-BioC-3_at 3831.7 P 4.4e-005
AFFX-BioDn-5_at 10290.3 P 4.4e-005
AFFX-BioDn-3_at 16146.5 P 4.4e-005
AFFX-CreX-5_at 33086.9 P 4.4e-005
AFFX-CreX-3_at 40709.2 P 4.4e-005
AFFX-DapX-5_at 73 M 0.054213
AFFX-DapX-M_at 106.1 A 0.216524
AFFX-DapX-3_at 142.7 P 0.00844
AFFX-LysX-5_at 25.7 A 0.5
AFFX-LysX-M_at 11.3 A 0.891021
AFFX-LysX-3_at 34.8 A 0.227636
AFFX-PheX-5_at 42 A 0.227636
AFFX-PheX-M_at 8.5 A 0.852061
AFFX-PheX-3_at 24.7 A 0.617401
AFFX-ThrX-5_at 34.9 A 0.686277
AFFX-ThrX-M_at 7.1 A 0.772383

Total number of rows: 54675

Table truncated, full table size 1444 Kbytes.




Supplementary file Size Download File type/resource
GSM46961.CEL.gz 7.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap