NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM46960 Query DataSets for GSM46960
Status Public on Mar 31, 2005
Title Lung - 31903
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.2
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 3
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: No
Pathological T: 2
Pathological N: 1
Pathological M: 0
Pathological Stage: 2B
Pathological Grade: 2
Primary Site: Lung
Histology: Adenosquamous Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1005.7 P 0.000662
AFFX-BioB-M_at 1417.5 P 4.4e-005
AFFX-BioB-3_at 692.3 P 5.2e-005
AFFX-BioC-5_at 2676.6 P 4.4e-005
AFFX-BioC-3_at 3507.4 P 4.4e-005
AFFX-BioDn-5_at 7565.4 P 5.2e-005
AFFX-BioDn-3_at 11556.7 P 4.4e-005
AFFX-CreX-5_at 28053.3 P 5.2e-005
AFFX-CreX-3_at 34347.2 P 4.4e-005
AFFX-DapX-5_at 656.8 P 7e-005
AFFX-DapX-M_at 1676.2 P 0.000581
AFFX-DapX-3_at 2155.7 P 5.2e-005
AFFX-LysX-5_at 124.5 P 0.00141
AFFX-LysX-M_at 179.6 P 0.00762
AFFX-LysX-3_at 348.5 P 0.00011
AFFX-PheX-5_at 162.4 P 7e-005
AFFX-PheX-M_at 194.1 P 0.001593
AFFX-PheX-3_at 359.8 P 0.002556
AFFX-ThrX-5_at 196.2 P 0.000225
AFFX-ThrX-M_at 379 P 0.00011

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46960.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap