NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM46956 Query DataSets for GSM46956
Status Public on Mar 31, 2005
Title Colon - 31877
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.14
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 6
Screening studies performed?: Yes
Diagnosis made by: Colonoscopy
Primary Site: Colon
Histology: Adenocarcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 419.7 P 0.001102
AFFX-BioB-M_at 420.8 P 0.000169
AFFX-BioB-3_at 323.2 P 0.002867
AFFX-BioC-5_at 1068.8 P 7e-005
AFFX-BioC-3_at 1264.2 P 5.2e-005
AFFX-BioDn-5_at 2518.8 P 4.4e-005
AFFX-BioDn-3_at 6127 P 7e-005
AFFX-CreX-5_at 11936.3 P 4.4e-005
AFFX-CreX-3_at 16950.5 P 4.4e-005
AFFX-DapX-5_at 253.4 P 0.00039
AFFX-DapX-M_at 1145 P 0.000857
AFFX-DapX-3_at 2393.9 P 5.2e-005
AFFX-LysX-5_at 150.9 P 0.00141
AFFX-LysX-M_at 230.2 P 0.015183
AFFX-LysX-3_at 455.7 P 0.00011
AFFX-PheX-5_at 101.5 P 0.004998
AFFX-PheX-M_at 219.5 P 0.004998
AFFX-PheX-3_at 396.1 P 0.000195
AFFX-ThrX-5_at 73.3 P 0.042962
AFFX-ThrX-M_at 239.9 P 0.000754

Total number of rows: 54675

Table truncated, full table size 1443 Kbytes.




Supplementary file Size Download File type/resource
GSM46956.CEL.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap