GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM46948

Query DataSets for GSM46948

Status

Public on Mar 31, 2005

Title

Ovary - 31836

Sample type

RNA

Source name

Ovary

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Quality metric = 28S to 18S: 1.58
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Alcohol Consumption?: No
Family History of Cancer?: Yes
Presenting Symptoms: Abdominal pain
Primary Site: Ovary
Histology: Serous Adenocarinoma

Submission date

Mar 31, 2005

Last update date

Aug 28, 2018

Contact name

Erin Curley

E-mail(s)

ecurley@intgen.org

Phone

602-343-8808

Fax

602-343-8440

URL

http://www.intgen.org

Organization name

IGC

Department

Lab

expO

Street address

445 N. 5th Street

City

Phoenix

State/province

ZIP/Postal code

85004

Country

USA

Platform ID

GPL570

Series (1)

GSE2109

Expression Project for Oncology (expO)

Relations

Reanalyzed by

GSE64985

Reanalyzed by

GSE119087

Data table header descriptions
ID_REF	The name of the probe set, blank for control probes
VALUE	The signal value calculated by MAS5, normalized
ABS_CALL	The detection value calculated by the MAS5
DETECTION P-VALUE	The detection p-value calculated by the MAS5

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	693.2	P	0.000754
AFFX-BioB-M_at	672.6	P	0.00039
AFFX-BioB-3_at	418	P	0.00039
AFFX-BioC-5_at	1725.1	P	4.4e-005
AFFX-BioC-3_at	2539	P	4.4e-005
AFFX-BioDn-5_at	4277	P	4.4e-005
AFFX-BioDn-3_at	7515.1	P	4.4e-005
AFFX-CreX-5_at	19593.1	P	4.4e-005
AFFX-CreX-3_at	23990.8	P	4.4e-005
AFFX-DapX-5_at	35	A	0.368438
AFFX-DapX-M_at	42.3	A	0.48511
AFFX-DapX-3_at	30.8	A	0.41138
AFFX-LysX-5_at	13.2	A	0.559354
AFFX-LysX-M_at	43.3	A	0.5
AFFX-LysX-3_at	49.5	P	0.033677
AFFX-PheX-5_at	6.1	A	0.834139
AFFX-PheX-M_at	6.5	A	0.941572
AFFX-PheX-3_at	42.7	A	0.425962
AFFX-ThrX-5_at	16.4	A	0.686277
AFFX-ThrX-M_at	23.8	A	0.58862

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM46948.CEL.gz	8.5 Mb	(ftp)(http)	CEL
Processed data included within Sample table