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Sample GSM46934 Query DataSets for GSM46934
Status Public on Mar 31, 2005
Title Breast - 29313
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.37
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Alcohol Consumption?: Yes
Family History of Cancer?: No
Mammogram: Yes
Number of years in which a mammogram was obtained?: 0-5
Oral contraceptives?: No
Primary Site: Breast
Histology: Ductal Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 839.3 P 0.000662
AFFX-BioB-M_at 1129.1 P 4.4e-005
AFFX-BioB-3_at 577.2 P 8.1e-005
AFFX-BioC-5_at 1991.4 P 4.4e-005
AFFX-BioC-3_at 2488.2 P 4.4e-005
AFFX-BioDn-5_at 5167.5 P 4.4e-005
AFFX-BioDn-3_at 9272.1 P 5.2e-005
AFFX-CreX-5_at 22815.7 P 5.2e-005
AFFX-CreX-3_at 27162.4 P 4.4e-005
AFFX-DapX-5_at 655.6 P 6e-005
AFFX-DapX-M_at 1759.1 P 0.000662
AFFX-DapX-3_at 2638 P 5.2e-005
AFFX-LysX-5_at 149.2 P 0.000297
AFFX-LysX-M_at 236.1 P 0.009337
AFFX-LysX-3_at 397.3 P 6e-005
AFFX-PheX-5_at 155.9 P 0.000972
AFFX-PheX-M_at 280.3 P 0.001102
AFFX-PheX-3_at 487.5 P 0.00034
AFFX-ThrX-5_at 189.2 P 0.000258
AFFX-ThrX-M_at 392.5 P 5.2e-005

Total number of rows: 54675

Table truncated, full table size 1449 Kbytes.




Supplementary file Size Download File type/resource
GSM46934.CEL.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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