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Sample GSM46928 Query DataSets for GSM46928
Status Public on Mar 31, 2005
Title Lung - 29277
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 70-80
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 6-10
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 40
Workplace or household smokers?: No
Pathological T: 3
Pathological N: 1
Pathological M: 0
Pathological Stage: 3A
Pathological Grade: 3
Primary Site: Lung
Histology: Mucoepidermoid Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 5105.9 P 0.000169
AFFX-BioB-M_at 10365.7 P 5.2e-005
AFFX-BioB-3_at 5572.7 P 5.2e-005
AFFX-BioC-5_at 16235 P 4.4e-005
AFFX-BioC-3_at 16941.4 P 4.4e-005
AFFX-BioDn-5_at 47989.9 P 4.4e-005
AFFX-BioDn-3_at 65245.2 P 4.4e-005
AFFX-CreX-5_at 150754 P 4.4e-005
AFFX-CreX-3_at 165860.5 P 4.4e-005
AFFX-DapX-5_at 35.9 A 0.724854
AFFX-DapX-M_at 352 A 0.165861
AFFX-DapX-3_at 199.8 A 0.340661
AFFX-LysX-5_at 309.2 A 0.095667
AFFX-LysX-M_at 34.5 A 0.971543
AFFX-LysX-3_at 349 P 0.015897
AFFX-PheX-5_at 33.8 A 0.852061
AFFX-PheX-M_at 16.8 A 0.949771
AFFX-PheX-3_at 230.3 A 0.58862
AFFX-ThrX-5_at 39.3 A 0.760937
AFFX-ThrX-M_at 121.2 A 0.60308

Total number of rows: 54675

Table truncated, full table size 1457 Kbytes.




Supplementary file Size Download File type/resource
GSM46928.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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