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GEO accession:
Sample GSM46925
Query DataSets for GSM46925
Status
Public on Mar 31, 2005
Title
Ovary - 29265
Sample type
RNA
Source name
Ovary
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 2.7
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 30
Presenting Symptoms: Bloating
Pathological T: 1a
Pathological N: 0
Pathological M: 0
Pathological Stage: 1A
Pathological Grade: 1
Primary Site: Ovary
Histology: Endometrioid Carcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
8485.9
P
4.4e-005
AFFX-BioB-M_at
15157.4
P
4.4e-005
AFFX-BioB-3_at
10503.6
P
4.4e-005
AFFX-BioC-5_at
24875.8
P
4.4e-005
AFFX-BioC-3_at
21575.1
P
4.4e-005
AFFX-BioDn-5_at
58160.6
P
4.4e-005
AFFX-BioDn-3_at
87649.4
P
4.4e-005
AFFX-CreX-5_at
159132.2
P
5.2e-005
AFFX-CreX-3_at
171002.9
P
4.4e-005
AFFX-DapX-5_at
265.9
P
0.000581
AFFX-DapX-M_at
677.7
P
0.001796
AFFX-DapX-3_at
1140.4
P
5.2e-005
AFFX-LysX-5_at
79
A
0.089099
AFFX-LysX-M_at
101.3
A
0.262791
AFFX-LysX-3_at
233.7
P
0.000258
AFFX-PheX-5_at
79.2
A
0.175307
AFFX-PheX-M_at
104.1
A
0.139482
AFFX-PheX-3_at
22
A
0.559354
AFFX-ThrX-5_at
8.9
A
0.672935
AFFX-ThrX-M_at
155.5
P
0.000224
Total number of rows:
54675
Table truncated, full table size
1445 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46925.CEL.gz
7.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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