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Sample GSM46919 Query DataSets for GSM46919
Status Public on Mar 31, 2005
Title Cervix Uteri - 29251
Sample type RNA
 
Source name Cervix Uteri
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.6
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 30
Have you ever been diagnosed as having HPV on your PAP smear?: No
Pathological T: 1b1
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B1
Pathological Grade: 2
Primary Site: Cervix Uteri
Histology: Squamous cell carcinoma, verrucous
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 658 P 0.000662
AFFX-BioB-M_at 994.9 P 5.2e-005
AFFX-BioB-3_at 535.7 P 7e-005
AFFX-BioC-5_at 1740.5 P 4.4e-005
AFFX-BioC-3_at 2263 P 4.4e-005
AFFX-BioDn-5_at 4604.1 P 4.4e-005
AFFX-BioDn-3_at 8568.1 P 5.2e-005
AFFX-CreX-5_at 19685.2 P 5.2e-005
AFFX-CreX-3_at 24919.6 P 4.4e-005
AFFX-DapX-5_at 404 P 9.5e-005
AFFX-DapX-M_at 1215.3 P 0.000662
AFFX-DapX-3_at 2359.9 P 5.2e-005
AFFX-LysX-5_at 136.3 P 0.002273
AFFX-LysX-M_at 218.6 P 0.018281
AFFX-LysX-3_at 515.9 P 7e-005
AFFX-PheX-5_at 101 P 0.002273
AFFX-PheX-M_at 203.9 P 0.000581
AFFX-PheX-3_at 267.5 P 0.000857
AFFX-ThrX-5_at 140.4 P 0.00141
AFFX-ThrX-M_at 250.2 P 0.000225

Total number of rows: 54675

Table truncated, full table size 1443 Kbytes.




Supplementary file Size Download File type/resource
GSM46919.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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