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Sample GSM46917 Query DataSets for GSM46917
Status Public on Mar 31, 2005
Title Small Intestine - 29247
Sample type RNA
 
Source name Small Intestine
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.81
Patient Age: 60-70
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 1
Have you ever had mononucleousis?: No
Have you ever had chemotherapy for any previous cancer prior to your current diagnosis?: Yes
Primary Site: Small Intestine
Histology: Metastatic Follicular Lymphoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1006.6 P 0.000581
AFFX-BioB-M_at 1066.7 P 5.2e-005
AFFX-BioB-3_at 625.5 P 0.000857
AFFX-BioC-5_at 2185 P 4.4e-005
AFFX-BioC-3_at 2882.7 P 5.2e-005
AFFX-BioDn-5_at 5937.5 P 4.4e-005
AFFX-BioDn-3_at 8150.3 P 4.4e-005
AFFX-CreX-5_at 21881.7 P 5.2e-005
AFFX-CreX-3_at 28508.5 P 4.4e-005
AFFX-DapX-5_at 104.3 P 0.000972
AFFX-DapX-M_at 445.6 P 0.001248
AFFX-DapX-3_at 1154.6 P 9.5e-005
AFFX-LysX-5_at 70.1 A 0.108979
AFFX-LysX-M_at 100.6 A 0.175328
AFFX-LysX-3_at 222.7 P 5.2e-005
AFFX-PheX-5_at 48.4 A 0.41138
AFFX-PheX-M_at 140.2 M 0.054213
AFFX-PheX-3_at 239.6 P 0.020022
AFFX-ThrX-5_at 37.2 A 0.470241
AFFX-ThrX-M_at 110.3 A 0.102165

Total number of rows: 54675

Table truncated, full table size 1446 Kbytes.




Supplementary file Size Download File type/resource
GSM46917.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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