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Sample GSM46913 Query DataSets for GSM46913
Status Public on Mar 31, 2005
Title Lung - 29233
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 11-15
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 30
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: Yes
Pathological T: 1
Pathological N: 0
Pathological M: 0
Pathological Stage: 1A
Pathological Grade: 3
Primary Site: Lung
Histology: Large cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 320.4 P 0.000754
AFFX-BioB-M_at 427.4 P 0.001102
AFFX-BioB-3_at 171.7 P 0.013811
AFFX-BioC-5_at 798.9 P 5.2e-005
AFFX-BioC-3_at 1216.5 P 7e-005
AFFX-BioDn-5_at 2207.5 P 5.2e-005
AFFX-BioDn-3_at 3376.3 P 6e-005
AFFX-CreX-5_at 8901.6 P 5.2e-005
AFFX-CreX-3_at 12465.1 P 4.4e-005
AFFX-DapX-5_at 75.9 P 0.01667
AFFX-DapX-M_at 348.3 P 0.002275
AFFX-DapX-3_at 788.5 P 9.5e-005
AFFX-LysX-5_at 31.5 A 0.131361
AFFX-LysX-M_at 76.8 A 0.108979
AFFX-LysX-3_at 157.9 P 0.000297
AFFX-PheX-5_at 23.5 A 0.262827
AFFX-PheX-M_at 63.1 P 0.018281
AFFX-PheX-3_at 136 A 0.102165
AFFX-ThrX-5_at 30.9 A 0.382599
AFFX-ThrX-M_at 54.1 A 0.250796

Total number of rows: 54675

Table truncated, full table size 1446 Kbytes.




Supplementary file Size Download File type/resource
GSM46913.CEL.gz 8.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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