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Sample GSM46904

Query DataSets for GSM46904

Status

Public on Mar 31, 2005

Title

Lung - 23952

Sample type

RNA

Source name

Lung

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Quality metric = 28S to 18S: 1.47
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: No
Primary Site: Lung
Histology: Bronchioloalveolar carcinoma

Submission date

Mar 31, 2005

Last update date

Aug 28, 2018

Contact name

Erin Curley

E-mail(s)

ecurley@intgen.org

Phone

602-343-8808

Fax

602-343-8440

URL

http://www.intgen.org

Organization name

IGC

Department

Lab

expO

Street address

445 N. 5th Street

City

Phoenix

State/province

ZIP/Postal code

85004

Country

USA

Platform ID

GPL570

Series (1)

GSE2109

Expression Project for Oncology (expO)

Relations

Reanalyzed by

GSE60486

Reanalyzed by

GSE64985

Reanalyzed by

GSE119087

Data table header descriptions
ID_REF	The name of the probe set, blank for control probes
VALUE	The signal value calculated by MAS5, normalized
ABS_CALL	The detection value calculated by the MAS5
DETECTION P-VALUE	The detection p-value calculated by the MAS5

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	729.3	P	0.00039
AFFX-BioB-M_at	937.8	P	7e-005
AFFX-BioB-3_at	492.5	P	0.001102
AFFX-BioC-5_at	1528	P	6e-005
AFFX-BioC-3_at	1907.1	P	4.4e-005
AFFX-BioDn-5_at	4291.6	P	4.4e-005
AFFX-BioDn-3_at	7287.8	P	4.4e-005
AFFX-CreX-5_at	17631.5	P	4.4e-005
AFFX-CreX-3_at	22874.8	P	4.4e-005
AFFX-DapX-5_at	27.3	A	0.440641
AFFX-DapX-M_at	36	A	0.749204
AFFX-DapX-3_at	165.2	A	0.083592
AFFX-LysX-5_at	80.7	A	0.262827
AFFX-LysX-M_at	4.8	A	0.960339
AFFX-LysX-3_at	81	A	0.139482
AFFX-PheX-5_at	8.5	A	0.941556
AFFX-PheX-M_at	3	A	0.986189
AFFX-PheX-3_at	21.6	A	0.659352
AFFX-ThrX-5_at	10.9	A	0.868639
AFFX-ThrX-M_at	22	A	0.659339

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM46904.CEL.gz	7.9 Mb	(ftp)(http)	CEL
Processed data included within Sample table