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Sample GSM46884 Query DataSets for GSM46884
Status Public on Mar 31, 2005
Title Lung - 23900
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 60-70
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 41-45
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 15
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: No
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B
Pathological Grade: 3
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1154.7 P 0.000446
AFFX-BioB-M_at 1638.6 P 4.4e-005
AFFX-BioB-3_at 974.5 P 4.4e-005
AFFX-BioC-5_at 2984.8 P 4.4e-005
AFFX-BioC-3_at 4268.1 P 4.4e-005
AFFX-BioDn-5_at 8513.4 P 4.4e-005
AFFX-BioDn-3_at 12153.3 P 4.4e-005
AFFX-CreX-5_at 32359.9 P 5.2e-005
AFFX-CreX-3_at 39495 P 4.4e-005
AFFX-DapX-5_at 1010.1 P 4.4e-005
AFFX-DapX-M_at 4110.3 P 0.00011
AFFX-DapX-3_at 8682.3 P 4.4e-005
AFFX-LysX-5_at 279.1 P 5.2e-005
AFFX-LysX-M_at 643 P 7e-005
AFFX-LysX-3_at 1584.9 P 4.4e-005
AFFX-PheX-5_at 377.7 P 4.4e-005
AFFX-PheX-M_at 782.7 P 5.2e-005
AFFX-PheX-3_at 792.1 P 4.4e-005
AFFX-ThrX-5_at 263.1 P 0.000258
AFFX-ThrX-M_at 937.6 P 4.4e-005

Total number of rows: 54675

Table truncated, full table size 1443 Kbytes.




Supplementary file Size Download File type/resource
GSM46884.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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