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Sample GSM46882 Query DataSets for GSM46882
Status Public on Mar 31, 2005
Title Kidney - 23896
Sample type RNA
 
Source name Kidney
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 11-15
Type of Tobacco Use: Cigarettes
Type of Tobacco Use: Cigars
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 1
Clinical T: 1a
Clinical N: 0
Clinical M: 0
Clinical Stage: 1
Clinical Grade: 1
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 510.3 P 0.000662
AFFX-BioB-M_at 482.8 P 4.4e-005
AFFX-BioB-3_at 305 P 0.000446
AFFX-BioC-5_at 901.1 P 5.2e-005
AFFX-BioC-3_at 1450.2 P 4.4e-005
AFFX-BioDn-5_at 2747.1 P 4.4e-005
AFFX-BioDn-3_at 5312 P 7e-005
AFFX-CreX-5_at 12194 P 5.2e-005
AFFX-CreX-3_at 16338.9 P 4.4e-005
AFFX-DapX-5_at 348.1 P 0.000169
AFFX-DapX-M_at 1441.6 P 0.000662
AFFX-DapX-3_at 2493.9 P 5.2e-005
AFFX-LysX-5_at 111 P 0.001248
AFFX-LysX-M_at 269 P 0.003595
AFFX-LysX-3_at 496.7 P 7e-005
AFFX-PheX-5_at 94.7 P 0.001248
AFFX-PheX-M_at 214.1 P 0.000296
AFFX-PheX-3_at 395.1 P 0.000225
AFFX-ThrX-5_at 97.7 P 0.011384
AFFX-ThrX-M_at 328.7 P 0.000147

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46882.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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