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GEO accession:
Sample GSM46881
Query DataSets for GSM46881
Status
Public on Mar 31, 2005
Title
Kidney - 23888
Sample type
RNA
Source name
Kidney
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.3
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 1
Clinical T: 1a
Clinical N: 0
Clinical M: 0
Clinical Stage: 1
Clinical Grade: 1
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1066.9
P
0.000297
AFFX-BioB-M_at
1429.7
P
4.4e-005
AFFX-BioB-3_at
813.4
P
4.4e-005
AFFX-BioC-5_at
2649.6
P
4.4e-005
AFFX-BioC-3_at
2949.4
P
4.4e-005
AFFX-BioDn-5_at
6908.8
P
4.4e-005
AFFX-BioDn-3_at
10530.5
P
4.4e-005
AFFX-CreX-5_at
27449.3
P
4.4e-005
AFFX-CreX-3_at
33153.5
P
4.4e-005
AFFX-DapX-5_at
51.6
A
0.354453
AFFX-DapX-M_at
15.4
A
0.804734
AFFX-DapX-3_at
54
A
0.470241
AFFX-LysX-5_at
46.5
A
0.083574
AFFX-LysX-M_at
9.4
A
0.876428
AFFX-LysX-3_at
3.8
A
0.737173
AFFX-PheX-5_at
12.5
A
0.686277
AFFX-PheX-M_at
2.3
A
0.981719
AFFX-PheX-3_at
23.5
A
0.749204
AFFX-ThrX-5_at
5.3
A
0.960391
AFFX-ThrX-M_at
8.6
A
0.834139
Total number of rows:
54675
Table truncated, full table size
1449 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46881.CEL.gz
8.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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