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Sample GSM46868 Query DataSets for GSM46868
Status Public on Mar 31, 2005
Title Lung - 22255
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.52
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: Yes
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 551.5 P 0.000857
AFFX-BioB-M_at 681.2 P 0.001102
AFFX-BioB-3_at 302.9 P 0.001593
AFFX-BioC-5_at 1144.6 P 5.2e-005
AFFX-BioC-3_at 1734.3 P 4.4e-005
AFFX-BioDn-5_at 2977.4 P 4.4e-005
AFFX-BioDn-3_at 6142.9 P 5.2e-005
AFFX-CreX-5_at 14060.8 P 4.4e-005
AFFX-CreX-3_at 18637.1 P 4.4e-005
AFFX-DapX-5_at 78.3 A 0.078002
AFFX-DapX-M_at 132 P 0.046482
AFFX-DapX-3_at 500.6 P 0.000297
AFFX-LysX-5_at 37.2 A 0.195266
AFFX-LysX-M_at 7.2 A 0.794268
AFFX-LysX-3_at 113.7 P 0.00034
AFFX-PheX-5_at 4.7 A 0.60308
AFFX-PheX-M_at 30 A 0.455413
AFFX-PheX-3_at 147.5 M 0.062929
AFFX-ThrX-5_at 32.3 A 0.645547
AFFX-ThrX-M_at 33.7 A 0.5

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46868.CEL.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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