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Sample GSM46838 Query DataSets for GSM46838
Status Public on Mar 31, 2005
Title R adnexa or metastatic transverse colon nodule - 1350
Sample type RNA
 
Source name R adnexa or metastatic transverse colon nodule
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.1
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 18
Presenting Symptoms: Abdominal pain
Presenting Symptoms: Bloating
Primary Site: Ovary
Histology: Mucinous Adenocarinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1138.2 P 0.000662
AFFX-BioB-M_at 1457.7 P 4.4e-005
AFFX-BioB-3_at 912.9 P 5.2e-005
AFFX-BioC-5_at 2584.6 P 4.4e-005
AFFX-BioC-3_at 4063.4 P 4.4e-005
AFFX-BioDn-5_at 8301.7 P 4.4e-005
AFFX-BioDn-3_at 12317 P 4.4e-005
AFFX-CreX-5_at 31336.9 P 5.2e-005
AFFX-CreX-3_at 39435.5 P 4.4e-005
AFFX-DapX-5_at 42.2 A 0.139482
AFFX-DapX-M_at 10.3 A 0.794268
AFFX-DapX-3_at 229.2 P 0.000754
AFFX-LysX-5_at 50 A 0.089478
AFFX-LysX-M_at 33.7 A 0.659339
AFFX-LysX-3_at 124.9 P 0.000169
AFFX-PheX-5_at 6.4 A 0.834139
AFFX-PheX-M_at 5.7 A 0.897835
AFFX-PheX-3_at 77.5 A 0.60308
AFFX-ThrX-5_at 51.1 A 0.425962
AFFX-ThrX-M_at 16 A 0.60308

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.




Supplementary file Size Download File type/resource
GSM46838.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table
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