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GEO accession:
Sample GSM46826
Query DataSets for GSM46826
Status
Public on Mar 31, 2005
Title
Kidney - 1306
Sample type
RNA
Source name
Kidney
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.3
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 1
Clinical T: 2
Clinical N: 0
Clinical M: 0
Clinical Stage: 2
Clinical Grade: 3
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
829.7
P
0.00039
AFFX-BioB-M_at
1203.7
P
4.4e-005
AFFX-BioB-3_at
660.2
P
8.1e-005
AFFX-BioC-5_at
1945
P
5.2e-005
AFFX-BioC-3_at
2544
P
4.4e-005
AFFX-BioDn-5_at
5480.5
P
4.4e-005
AFFX-BioDn-3_at
10363.9
P
4.4e-005
AFFX-CreX-5_at
25084.2
P
5.2e-005
AFFX-CreX-3_at
29093.9
P
4.4e-005
AFFX-DapX-5_at
61.1
A
0.123572
AFFX-DapX-M_at
29.5
A
0.659339
AFFX-DapX-3_at
5.6
A
0.932322
AFFX-LysX-5_at
67.8
A
0.175328
AFFX-LysX-M_at
13.2
A
0.712257
AFFX-LysX-3_at
50.1
A
0.147939
AFFX-PheX-5_at
4.5
A
0.98333
AFFX-PheX-M_at
6.4
A
0.868639
AFFX-PheX-3_at
33.9
A
0.559354
AFFX-ThrX-5_at
7.1
A
0.860518
AFFX-ThrX-M_at
13.3
A
0.48511
Total number of rows:
54675
Table truncated, full table size
1444 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46826.CEL.gz
8.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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