GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM46825
Query DataSets for GSM46825
Status
Public on Mar 31, 2005
Title
Kidney - 1304
Sample type
RNA
Source name
Kidney
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.1
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 13
Clinical T: 1b
Clinical N: 0
Clinical M: 0
Clinical Stage: 1
Clinical Grade: 2
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
724.5
P
0.000662
AFFX-BioB-M_at
1035.7
P
4.4e-005
AFFX-BioB-3_at
579.4
P
7e-005
AFFX-BioC-5_at
1919.1
P
5.2e-005
AFFX-BioC-3_at
2576
P
4.4e-005
AFFX-BioDn-5_at
5191.8
P
4.4e-005
AFFX-BioDn-3_at
8455.5
P
4.4e-005
AFFX-CreX-5_at
21470.6
P
5.2e-005
AFFX-CreX-3_at
26343.6
P
4.4e-005
AFFX-DapX-5_at
5.1
A
0.724854
AFFX-DapX-M_at
34.2
A
0.39692
AFFX-DapX-3_at
4.3
A
0.963431
AFFX-LysX-5_at
27.4
A
0.659339
AFFX-LysX-M_at
21.6
A
0.737173
AFFX-LysX-3_at
30.5
A
0.239063
AFFX-PheX-5_at
5.2
A
0.712257
AFFX-PheX-M_at
7.7
A
0.876428
AFFX-PheX-3_at
90.5
A
0.185131
AFFX-ThrX-5_at
6.4
A
0.876428
AFFX-ThrX-M_at
10.7
A
0.876428
Total number of rows:
54675
Table truncated, full table size
1444 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46825.CEL.gz
8.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
