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Sample GSM46824 Query DataSets for GSM46824
Status Public on Mar 31, 2005
Title Lung - 1299
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 60-70
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 46-50
Type of Tobacco Use: Chewing Tobacco
Type of Tobacco Use: Cigarettes
Type of Tobacco Use: Cigars
Type of Tobacco Use: Pipe
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 30
Workplace or household smokers?: Yes
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B
Pathological Grade: 3
Primary Site: Lung
Histology: Adenocarcinoma, NOS
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 551.2 P 0.000662
AFFX-BioB-M_at 721.6 P 4.4e-005
AFFX-BioB-3_at 495.2 P 7e-005
AFFX-BioC-5_at 1849.3 P 4.4e-005
AFFX-BioC-3_at 2252 P 5.2e-005
AFFX-BioDn-5_at 4230.8 P 4.4e-005
AFFX-BioDn-3_at 7978.1 P 5.2e-005
AFFX-CreX-5_at 18269.1 P 5.2e-005
AFFX-CreX-3_at 22128.4 P 4.4e-005
AFFX-DapX-5_at 39.9 A 0.123572
AFFX-DapX-M_at 21.7 A 0.574038
AFFX-DapX-3_at 5.3 A 0.852061
AFFX-LysX-5_at 29.2 A 0.239063
AFFX-LysX-M_at 7 A 0.814869
AFFX-LysX-3_at 35 A 0.139482
AFFX-PheX-5_at 8.6 A 0.760937
AFFX-PheX-M_at 3.7 A 0.9273
AFFX-PheX-3_at 33.8 A 0.470241
AFFX-ThrX-5_at 5.6 A 0.737173
AFFX-ThrX-M_at 2 A 0.984817

Total number of rows: 54675

Table truncated, full table size 1443 Kbytes.




Supplementary file Size Download File type/resource
GSM46824.CEL.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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