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GEO accession:
Sample GSM46823
Query DataSets for GSM46823
Status
Public on Mar 31, 2005
Title
Colon - 1293
Sample type
RNA
Source name
Colon
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.4
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 1
Presenting Symptoms: Abdominal mass
Presenting Symptoms: Abdominal pain
Presenting Symptoms: Bloating
Clinical T: 3c
Clinical N: 0
Clinical M: 0
Clinical Stage: 3C
Clinical Grade: 3
Primary Site: Ovary
Histology: Metastatic Papillary Serous Adenocarcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1041.1
P
0.000169
AFFX-BioB-M_at
1658
P
4.4e-005
AFFX-BioB-3_at
1064.5
P
5.2e-005
AFFX-BioC-5_at
2450.9
P
4.4e-005
AFFX-BioC-3_at
3030.3
P
4.4e-005
AFFX-BioDn-5_at
8151.9
P
4.4e-005
AFFX-BioDn-3_at
13155.7
P
4.4e-005
AFFX-CreX-5_at
29303.2
P
4.4e-005
AFFX-CreX-3_at
37826.4
P
4.4e-005
AFFX-DapX-5_at
66.6
A
0.239063
AFFX-DapX-M_at
88.2
A
0.227636
AFFX-DapX-3_at
133.3
P
0.012547
AFFX-LysX-5_at
7.9
A
0.941556
AFFX-LysX-M_at
8.9
A
0.814869
AFFX-LysX-3_at
42.7
A
0.455409
AFFX-PheX-5_at
41.5
A
0.227636
AFFX-PheX-M_at
2.9
A
0.99238
AFFX-PheX-3_at
47.4
A
0.440646
AFFX-ThrX-5_at
30.1
A
0.544587
AFFX-ThrX-M_at
18.6
A
0.559354
Total number of rows:
54675
Table truncated, full table size
1444 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46823.CEL.gz
7.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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