|
| Status |
Public on Jan 13, 2010 |
| Title |
DFCI #129 10 ng rep1 |
| Sample type |
RNA |
| |
|
| Source name |
Human ovarian tumor
|
| Organism |
Homo sapiens |
| Characteristics |
gender: female
tissue: ovarian tumor
cell type: DFCI 129
amount: 10 ng
|
| Treatment protocol |
Formalin-fixed, paraffin-embedded.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with a modified protocol of the RNeasy FFPE Kit (Qiagen).
|
| Label |
Cy3
|
| Label protocol |
Standard Illumina labelling protocol.
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol.
|
| Scan protocol |
Standard Illumina scanning protocol.
|
| Description |
replicate 1
|
| Data processing |
Raw data was analyzed using GenomeStudio v1.1.
Non-normalized data is available in the 'GSE18769_nonorm_nobkgd.txt' file, which is linked to the Series GSE18769 record as a supplementary file.
|
| |
|
| Submission date |
Oct 27, 2009 |
| Last update date |
Jan 13, 2010 |
| Contact name |
Craig April |
| E-mail(s) |
capril@illumina.com
|
| Organization name |
Illumina, Inc.
|
| Street address |
9885 Towne Centre Drive
|
| City |
San Diego |
| State/province |
CA |
| ZIP/Postal code |
92121-1975 |
| Country |
USA |
| |
|
| Platform ID |
GPL6883 |
| Series (2) |
| GSE17599 |
Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples |
| GSE18769 |
Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Ovarian Tumor Tissue Samples: Dilutions |
|
