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Sample GSM45604 Query DataSets for GSM45604
Status Public on May 30, 2005
Title ChromatinB2-IP1
Sample type genomic
 
Channel 1
Source name anti-HSF enriched chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
Channel 2
Source name pre-immune sera chromatin
Organism Drosophila melanogaster
Extracted molecule genomic DNA
 
 
Description Genomic tiling array interogated with heat shock factor immunopurified chromatin.
 
Submission date Mar 21, 2005
Last update date May 29, 2005
Contact name Steve Russell
E-mail(s) s.russell@gen.cam.ac.uk
Phone +44 (0) 1223 766929
Fax +44 (0) 1223 333992
Organization name University of Cambridge
Department Department of Genetics
Street address Downing Street
City Cambridge
ZIP/Postal code CB2 3EH
Country United Kingdom
 
Platform ID GPL1918
Series (1)
GSE2423 Tiling Array HSF immunopurification

Data table header descriptions
ID_REF
VALUE VSN normalised ratio anti-HSF to pre-immune
fgMedian1 foreground (spot) median pixel intensity of channel 1
bgMedian1 background (local area around spot) median pixel intensity of channel 1
fgAdjMAD1 foreground (spot) pixel intensity variability of channel 1
bgAdjMAD1 background (local area around spot) pixel intensity variability of channel 1
fgMedian2 foreground (spot) median pixel intensity of channel 2
bgMedian2 background (local area around spot) median pixel intensity of channel 2
fgAdjMAD2 foreground (spot) pixel intensity variability of channel 2
bgAdjMAD2 background (local area around spot) pixel intensity variability of channel 2
fgN number of pixels in the foreground
bgN number of pixels in the background

Data table
ID_REF VALUE fgMedian1 bgMedian1 fgAdjMAD1 bgAdjMAD1 fgMedian2 bgMedian2 fgAdjMAD2 bgAdjMAD2 fgN bgN
1001003457 -0.1498971 14851 859 5132.76 176.429 4040 406 1295.79 35.5824 349 3095
1001003481 -0.183542 17639 855 1914.04 47.4432 4865 413 551.527 22.239 349 3095
1001003505 -0.5497689 14947 733 10123.2 42.9954 5222 418 3564.17 22.239 421 2983
1001003529 -0.5070434 10438 1014 4188.34 57.8214 3585 453 1512.25 23.7216 293 3179
1001003553 -0.4067247 18233 1386 9872.63 123.056 5789 482 2956.3 29.652 489 2871
1001003577 -0.2564106 17900 842 2216.49 48.9258 5167 422 674.583 23.7216 349 3095
1001003601 -0.504263 25282 842 4722.08 51.891 8500 438 1516.7 25.2042 421 2983
1001003625 -0.2457622 17596 1002 2874.76 54.8562 5048 422 766.504 20.7564 293 3179
1001003458 -0.3622101 12849 711 4111.25 38.5476 4009 362 1151.98 17.7912 421 2983
1001003482 -0.4448105 4589 744 2554.52 44.478 1593 381 809.5 17.7912 489 2871
1001003506 -0.1637982 20221 599 3054.16 38.5476 5481 369 813.947 19.2738 489 2871
1001003530 -0.1486181 21563 699 1761.33 32.6172 5776 379 469.984 17.7912 349 3095
1001003554 -0.2832053 15212 1291 3705.02 75.6126 4491 465 1006.69 22.239 421 2983
1001003578 -0.0850683 16872 696 1719.82 40.0302 4383 379 425.506 20.7564 349 3095
1001003602 -0.3775204 20295 638 9647.28 31.1346 6308 370 2616.79 17.7912 489 2871
1001003626 -0.1503889 10448 641 1672.37 25.2042 2899 362 514.462 16.3086 293 3179
1001003459 -0.2632207 10687 652 3857.73 28.1694 3166 356 1057.09 16.3086 421 2983
1001003483 -0.3390152 12233 779 2514.49 35.5824 3770 380 699.787 16.3086 293 3179
1001003507 -0.2632594 14822 624 3306.2 40.0302 4326 364 855.46 17.7912 349 3095
1001003531 -0.3777342 3150 679 1470.74 29.652 1105 369 450.71 17.7912 421 2983

Total number of rows: 3333

Table truncated, full table size 257 Kbytes.




Supplementary data files not provided
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