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Sample GSM4473444 Query DataSets for GSM4473444
Status Public on May 26, 2020
Title RBD00006-T
Sample type SRA
 
Source name peripheral blood neutrophil
Organism Homo sapiens
Characteristics cell type: peripheral blood neutrophil
condition: steady state
sorting: Sorted by CD33+
Extracted molecule total RNA
Extraction protocol BD Rhapsody Cartridge Reagent Kit
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina NovaSeq 6000
 
Data processing sequenced reads of human were aligned to the hg38 human transcriptome, then quantify the expression of transcripts in each cell using BD™ Rhapsody Whole Transcriptome Assay Analysis Pipeline
Genome_build: hg38 (human)
Supplementary_files_format_and_content: tab-delimited text files include UMIs for each Sample
 
Submission date Apr 13, 2020
Last update date May 27, 2020
Contact name Xuemei Xie
E-mail(s) xiexuemei.fiona@gmail.com
Organization name Boston Children's Hospital
Department Transfusion Medicine
Lab Luo's Lab
Street address 811 Enders Building, 320 Longwood Ave.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL24676
Series (2)
GSE137539 Single-cell transcriptome profiling reveals neutrophil heterogeneity in homeostasis and infection
GSE137540 Single-cell transcriptome profiling reveals neutrophil heterogeneity in homeostasis and infection
Relations
BioSample SAMN14591038
SRA SRX8108915

Supplementary file Size Download File type/resource
GSM4473444_RBD00006.txt.gz 3.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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