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Sample GSM437982 Query DataSets for GSM437982
Status Public on Jan 13, 2010
Title MCF-7 100 ng IVT-based rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics platform_id: IVT-based
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label biotin-streptavidin Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17575 Whole-Genome Gene Expression Profiling of FFPE Tissue Samples with WG-DASL and IVT-based assays
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7-100 DH rep2.Avg_NBEADS
MCF-7-100 DH rep2.BEAD_STDERR
MCF-7-100 DH rep2.Detection Pval

Data table
ID_REF VALUE MCF-7-100 DH rep2.Avg_NBEADS MCF-7-100 DH rep2.BEAD_STDERR MCF-7-100 DH rep2.Detection Pval
ILMN_1762337 77.04628 44 4.591972 0.1326861
ILMN_2055271 121.9865 18 6.42294 0.05825243
ILMN_2383229 63.45789 26 4.697085 0.1747573
ILMN_1806310 43.78106 38 3.837219 0.5145631
ILMN_1779670 63.35933 34 3.809202 0.1747573
ILMN_2321282 107.961 49 3.176783 0.07443365
ILMN_1772582 58.77211 38 3.527832 0.2071197
ILMN_1717783 38.58017 32 3.658373 0.7281553
ILMN_1814316 34.39806 32 5.060259 0.8867314
ILMN_2359168 61.08708 47 3.648374 0.1877023
ILMN_1731507 45.60571 29 4.3428 0.433657
ILMN_1787689 128.984 47 3.639405 0.05177994
ILMN_1745607 44.50933 43 3.326876 0.4724919
ILMN_2136495 36.99812 23 3.477886 0.7993528
ILMN_1668111 41.062 42 3.226447 0.6343042
ILMN_2295559 53.42385 45 3.015185 0.2588997
ILMN_1735045 1697.245 51 14.98302 0
ILMN_1680754 60.23038 37 4.177943 0.2006472
ILMN_2375184 65.63525 37 3.629476 0.1618123
ILMN_1659452 92.53751 48 3.339851 0.09061489

Total number of rows: 24526

Table truncated, full table size 985 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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