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Sample GSM437979 Query DataSets for GSM437979
Status Public on Jan 13, 2010
Title Raji 100 ng IVT-based rep1
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics platform_id: IVT-based
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label biotin-streptavidin Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17575 Whole-Genome Gene Expression Profiling of FFPE Tissue Samples with WG-DASL and IVT-based assays
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
Raji-100 DH rep1.Avg_NBEADS
Raji-100 DH rep1.BEAD_STDERR
Raji-100 DH rep1.Detection Pval

Data table
ID_REF VALUE Raji-100 DH rep1.Avg_NBEADS Raji-100 DH rep1.BEAD_STDERR Raji-100 DH rep1.Detection Pval
ILMN_1762337 71.82753 38 3.637834 0.2394822
ILMN_2055271 196.4734 33 4.856467 0.06148867
ILMN_2383229 122.3376 34 3.713421 0.1132686
ILMN_1806310 103.5969 32 5.350153 0.1294498
ILMN_1779670 34.56477 36 2.811997 0.9546925
ILMN_2321282 138.529 49 2.866557 0.1003236
ILMN_1772582 52.79742 43 3.808964 0.407767
ILMN_1717783 50.60684 34 3.911417 0.4368932
ILMN_1814316 46.45417 32 4.282085 0.5598705
ILMN_2359168 94.69778 42 2.955167 0.1585761
ILMN_1731507 35.20033 28 4.631054 0.9482201
ILMN_1787689 64.22592 48 3.913369 0.2912621
ILMN_1745607 33.8666 34 2.785494 0.9579288
ILMN_2136495 30.65277 31 4.158733 0.9935275
ILMN_1668111 31.76595 49 3.284555 0.9902912
ILMN_2295559 44.73362 50 3.59982 0.6116505
ILMN_1735045 3000.007 44 29.87045 0
ILMN_1680754 71.61621 34 3.344044 0.2427184
ILMN_2375184 64.03902 42 3.315191 0.2944984
ILMN_1659452 67.4106 47 3.953584 0.2783172

Total number of rows: 24526

Table truncated, full table size 989 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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