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Sample GSM437978 Query DataSets for GSM437978
Status Public on Jan 13, 2010
Title MCF-7 100 ng WG-DASL rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics platform_id: WG-DASL
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17575 Whole-Genome Gene Expression Profiling of FFPE Tissue Samples with WG-DASL and IVT-based assays
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7-100 WGD rep2.Avg_NBEADS
MCF-7-100 WGD rep2.BEAD_STDERR
MCF-7-100 WGD rep2.Detection Pval

Data table
ID_REF VALUE MCF-7-100 WGD rep2.Avg_NBEADS MCF-7-100 WGD rep2.BEAD_STDERR MCF-7-100 WGD rep2.Detection Pval
ILMN_1762337 687.9371 38 66.5842 0
ILMN_2055271 89.98258 43 5.177938 0.01941748
ILMN_2383229 46.6011 29 4.707923 0.1585761
ILMN_1806310 44.24633 36 3.804497 0.2394822
ILMN_1779670 39.75772 55 2.812294 0.5016181
ILMN_2321282 52.65722 34 3.14377 0.0776699
ILMN_1772582 80.21623 43 4.873237 0.01941748
ILMN_1717783 174.4662 40 19.75241 0
ILMN_1814316 40.59259 35 2.901317 0.4401295
ILMN_2359168 43.2068 39 3.59468 0.2880259
ILMN_1731507 33.65079 37 3.473341 0.8932039
ILMN_1787689 47.8727 43 3.885509 0.1326861
ILMN_1745607 61.07373 30 6.94937 0.0420712
ILMN_2136495 86.67723 31 4.614209 0.01941748
ILMN_1668111 39.61232 39 2.557131 0.5242718
ILMN_2295559 38.4458 45 2.15783 0.6407767
ILMN_1735045 293.0118 35 25.06381 0
ILMN_1680754 45.23233 34 3.629092 0.197411
ILMN_2375184 46.55058 48 3.442942 0.1585761
ILMN_1659452 48.68555 40 2.679204 0.1197411

Total number of rows: 24526

Table truncated, full table size 939 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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